* using log directory ‘/home/bolker/lme4check2/check/multcomp.Rcheck’
* checking for file ‘multcomp/DESCRIPTION’ ... OK
* this is package ‘multcomp’ version ‘1.4-0’
* checking whether package ‘multcomp’ can be installed ... OK
generic '==' and siglist 'Symbol,Symbol'
generic '==' and siglist 'Symbol,character'
generic 'as.character' and siglist 'Symbol'
All user-level objects in a package (including S4 classes and methods)
* checking differences from ‘multcomp-Ex.Rout’ to ‘multcomp-Ex.Rout.save’ ... OK
< ../../../R-devel/src/main/arithmetic.c:1012:3: runtime error: division by zero
< ../Core/cholmod_dense.c:555:5: runtime error: member access within misaligned address 0x7fff687ee08c for type 'cholmod_dense' (aka 'struct cholmod_dense_struct'), which requires 8 byte alignment
< 0x7fff687ee08c: note: pointer points here
< ../Core/cholmod_dense.c:555:5: runtime error: load of misaligned address 0x7fff687ee0ac for type 'void *', which requires 8 byte alignment
< 0x7fff687ee0ac: note: pointer points here
< ../Core/cholmod_dense.c:556:12: runtime error: member access within misaligned address 0x7fff687ee08c for type 'cholmod_dense' (aka 'struct cholmod_dense_struct'), which requires 8 byte alignment
< ../Core/cholmod_dense.c:556:12: runtime error: load of misaligned address 0x7fff687ee0a4 for type 'size_t' (aka 'unsigned long'), which requires 8 byte alignment
< 0x7fff687ee0a4: note: pointer points here
< ../Core/cholmod_dense.c:556:19: runtime error: member access within misaligned address 0x7fff687ee08c for type 'cholmod_dense' (aka 'struct cholmod_dense_struct'), which requires 8 byte alignment
< ../Core/cholmod_dense.c:556:19: runtime error: load of misaligned address 0x7fff687ee08c for type 'size_t' (aka 'unsigned long'), which requires 8 byte alignment
< ../Core/cholmod_dense.c:567:16: runtime error: member access within misaligned address 0x7fff687ee08c for type 'cholmod_dense' (aka 'struct cholmod_dense_struct'), which requires 8 byte alignment
< ../Core/t_cholmod_dense.c:145:15: runtime error: member access within misaligned address 0x7fff687ee08c for type 'cholmod_dense' (aka 'struct cholmod_dense_struct'), which requires 8 byte alignment
< ../Core/t_cholmod_dense.c:145:15: runtime error: load of misaligned address 0x7fff687ee08c for type 'size_t' (aka 'unsigned long'), which requires 8 byte alignment
< ../Core/t_cholmod_dense.c:146:15: runtime error: member access within misaligned address 0x7fff687ee08c for type 'cholmod_dense' (aka 'struct cholmod_dense_struct'), which requires 8 byte alignment
< ../Core/t_cholmod_dense.c:146:15: runtime error: load of misaligned address 0x7fff687ee094 for type 'size_t' (aka 'unsigned long'), which requires 8 byte alignment
< 0x7fff687ee094: note: pointer points here
< ../Core/t_cholmod_dense.c:147:12: runtime error: member access within misaligned address 0x7fff687ee08c for type 'cholmod_dense' (aka 'struct cholmod_dense_struct'), which requires 8 byte alignment
< ../Core/t_cholmod_dense.c:147:12: runtime error: load of misaligned address 0x7fff687ee0a4 for type 'size_t' (aka 'unsigned long'), which requires 8 byte alignment
< ../Core/t_cholmod_dense.c:148:13: runtime error: member access within misaligned address 0x7fff687ee08c for type 'cholmod_dense' (aka 'struct cholmod_dense_struct'), which requires 8 byte alignment
< ../Core/t_cholmod_dense.c:148:13: runtime error: load of misaligned address 0x7fff687ee0ac for type 'void *', which requires 8 byte alignment
< ../Core/t_cholmod_dense.c:149:13: runtime error: member access within misaligned address 0x7fff687ee08c for type 'cholmod_dense' (aka 'struct cholmod_dense_struct'), which requires 8 byte alignment
< ../Core/t_cholmod_dense.c:149:13: runtime error: load of misaligned address 0x7fff687ee0b4 for type 'void *', which requires 8 byte alignment
< 0x7fff687ee0b4: note: pointer points here
< ../Core/cholmod_copy.c:286:32: runtime error: member access within misaligned address 0x7fff68818abc for type 'cholmod_sparse' (aka 'struct cholmod_sparse_struct'), which requires 8 byte alignment
< 0x7fff68818abc: note: pointer points here
< ../Core/cholmod_copy.c:287:5: runtime error: member access within misaligned address 0x7fff68818abc for type 'cholmod_sparse' (aka 'struct cholmod_sparse_struct'), which requires 8 byte alignment
< ../Core/cholmod_copy.c:287:5: runtime error: load of misaligned address 0x7fff68818aec for type 'void *', which requires 8 byte alignment
< 0x7fff68818aec: note: pointer points here
< ../Core/cholmod_copy.c:289:15: runtime error: member access within misaligned address 0x7fff68818abc for type 'cholmod_sparse' (aka 'struct cholmod_sparse_struct'), which requires 8 byte alignment
< ../Core/cholmod_copy.c:289:15: runtime error: load of misaligned address 0x7fff68818abc for type 'size_t' (aka 'unsigned long'), which requires 8 byte alignment
< ../Core/cholmod_copy.c:290:15: runtime error: member access within misaligned address 0x7fff68818abc for type 'cholmod_sparse' (aka 'struct cholmod_sparse_struct'), which requires 8 byte alignment
< ../Core/cholmod_copy.c:290:15: runtime error: load of misaligned address 0x7fff68818ac4 for type 'size_t' (aka 'unsigned long'), which requires 8 byte alignment
< 0x7fff68818ac4: note: pointer points here
< ../Core/cholmod_copy.c:291:22: runtime error: member access within misaligned address 0x7fff68818abc for type 'cholmod_sparse' (aka 'struct cholmod_sparse_struct'), which requires 8 byte alignment
< ../Core/cholmod_copy.c:315:14: runtime error: member access within misaligned address 0x7fff68818abc for type 'cholmod_sparse' (aka 'struct cholmod_sparse_struct'), which requires 8 byte alignment
< ../Core/cholmod_band.c:74:32: runtime error: member access within misaligned address 0x7fff68818abc for type 'cholmod_sparse' (aka 'struct cholmod_sparse_struct'), which requires 8 byte alignment
< ../Core/cholmod_band.c:75:5: runtime error: member access within misaligned address 0x7fff68818abc for type 'cholmod_sparse' (aka 'struct cholmod_sparse_struct'), which requires 8 byte alignment
< ../Core/cholmod_band.c:75:5: runtime error: load of misaligned address 0x7fff68818aec for type 'void *', which requires 8 byte alignment
< ../Core/cholmod_band.c:77:17: runtime error: member access within misaligned address 0x7fff68818abc for type 'cholmod_sparse' (aka 'struct cholmod_sparse_struct'), which requires 8 byte alignment
< ../Core/cholmod_band.c:93:14: runtime error: member access within misaligned address 0x7fff68818abc for type 'cholmod_sparse' (aka 'struct cholmod_sparse_struct'), which requires 8 byte alignment
< ../Core/cholmod_band.c:93:14: runtime error: load of misaligned address 0x7fff68818ad4 for type 'void *', which requires 8 byte alignment
< 0x7fff68818ad4: note: pointer points here
< ../Core/cholmod_band.c:94:14: runtime error: member access within misaligned address 0x7fff68818abc for type 'cholmod_sparse' (aka 'struct cholmod_sparse_struct'), which requires 8 byte alignment
< ../Core/cholmod_band.c:94:14: runtime error: load of misaligned address 0x7fff68818ae4 for type 'void *', which requires 8 byte alignment
< 0x7fff68818ae4: note: pointer points here
< ../Core/cholmod_band.c:95:14: runtime error: member access within misaligned address 0x7fff68818abc for type 'cholmod_sparse' (aka 'struct cholmod_sparse_struct'), which requires 8 byte alignment
< ../Core/cholmod_band.c:95:14: runtime error: load of misaligned address 0x7fff68818adc for type 'void *', which requires 8 byte alignment
< 0x7fff68818adc: note: pointer points here
< ../Core/cholmod_band.c:96:14: runtime error: member access within misaligned address 0x7fff68818abc for type 'cholmod_sparse' (aka 'struct cholmod_sparse_struct'), which requires 8 byte alignment
< ../Core/cholmod_band.c:96:14: runtime error: load of misaligned address 0x7fff68818aec for type 'void *', which requires 8 byte alignment
< ../Core/cholmod_band.c:97:17: runtime error: member access within misaligned address 0x7fff68818abc for type 'cholmod_sparse' (aka 'struct cholmod_sparse_struct'), which requires 8 byte alignment
< ../Core/cholmod_band.c:100:12: runtime error: member access within misaligned address 0x7fff68818abc for type 'cholmod_sparse' (aka 'struct cholmod_sparse_struct'), which requires 8 byte alignment
< ../Core/cholmod_band.c:105:12: runtime error: member access within misaligned address 0x7fff68818abc for type 'cholmod_sparse' (aka 'struct cholmod_sparse_struct'), which requires 8 byte alignment
< ../Core/cholmod_band.c:110:15: runtime error: member access within misaligned address 0x7fff68818abc for type 'cholmod_sparse' (aka 'struct cholmod_sparse_struct'), which requires 8 byte alignment
< ../Core/cholmod_band.c:110:15: runtime error: load of misaligned address 0x7fff68818ac4 for type 'size_t' (aka 'unsigned long'), which requires 8 byte alignment
< ../Core/cholmod_band.c:111:15: runtime error: member access within misaligned address 0x7fff68818abc for type 'cholmod_sparse' (aka 'struct cholmod_sparse_struct'), which requires 8 byte alignment
< ../Core/cholmod_band.c:111:15: runtime error: load of misaligned address 0x7fff68818abc for type 'size_t' (aka 'unsigned long'), which requires 8 byte alignment
< ../Core/cholmod_band.c:185:35: runtime error: member access within misaligned address 0x7fff68818abc for type 'cholmod_sparse' (aka 'struct cholmod_sparse_struct'), which requires 8 byte alignment
< ../Core/cholmod_band.c:185:35: runtime error: load of misaligned address 0x7fff68818abc for type 'size_t' (aka 'unsigned long'), which requires 8 byte alignment
< ../Core/cholmod_band.c:186:6: runtime error: member access within misaligned address 0x7fff68818abc for type 'cholmod_sparse' (aka 'struct cholmod_sparse_struct'), which requires 8 byte alignment
< ../Core/cholmod_band.c:186:25: runtime error: member access within misaligned address 0x7fff68818abc for type 'cholmod_sparse' (aka 'struct cholmod_sparse_struct'), which requires 8 byte alignment
< detaching 'package:lme4', 'package:Matrix', 'package:nlme',
> detaching 'package:lme4', 'package:Rcpp', 'package:Matrix',
Comparing ‘bugfix.Rout’ to ‘bugfix.Rout.save’ ... OK
Comparing ‘regtest-Tukey.Rout’ to ‘regtest-Tukey.Rout.save’ ... OK
Comparing ‘regtest-anova.Rout’ to ‘regtest-anova.Rout.save’ ... OK
Comparing ‘regtest-chrlinfct2matrix.Rout’ to ‘regtest-chrlinfct2matrix.Rout.save’ ... OK
Comparing ‘regtest-interface.Rout’ to ‘regtest-interface.Rout.save’ ... OK
Comparing ‘regtest-lme.Rout’ to ‘regtest-lme.Rout.save’ ...35,282d34
< ../Core/cholmod_dense.c:555:5: runtime error: member access within misaligned address 0x7fff9c66f83c for type 'cholmod_dense' (aka 'struct cholmod_dense_struct'), which requires 8 byte alignment
< 0x7fff9c66f83c: note: pointer points here
< ../Core/cholmod_dense.c:555:5: runtime error: load of misaligned address 0x7fff9c66f85c for type 'void *', which requires 8 byte alignment
< 0x7fff9c66f85c: note: pointer points here
< ../Core/cholmod_dense.c:556:12: runtime error: member access within misaligned address 0x7fff9c66f83c for type 'cholmod_dense' (aka 'struct cholmod_dense_struct'), which requires 8 byte alignment
< ../Core/cholmod_dense.c:556:12: runtime error: load of misaligned address 0x7fff9c66f854 for type 'size_t' (aka 'unsigned long'), which requires 8 byte alignment
< 0x7fff9c66f854: note: pointer points here
< ../Core/cholmod_dense.c:556:19: runtime error: member access within misaligned address 0x7fff9c66f83c for type 'cholmod_dense' (aka 'struct cholmod_dense_struct'), which requires 8 byte alignment
< ../Core/cholmod_dense.c:556:19: runtime error: load of misaligned address 0x7fff9c66f83c for type 'size_t' (aka 'unsigned long'), which requires 8 byte alignment
< ../Core/cholmod_dense.c:567:16: runtime error: member access within misaligned address 0x7fff9c66f83c for type 'cholmod_dense' (aka 'struct cholmod_dense_struct'), which requires 8 byte alignment
< ../Core/t_cholmod_dense.c:145:15: runtime error: member access within misaligned address 0x7fff9c66f83c for type 'cholmod_dense' (aka 'struct cholmod_dense_struct'), which requires 8 byte alignment
< ../Core/t_cholmod_dense.c:145:15: runtime error: load of misaligned address 0x7fff9c66f83c for type 'size_t' (aka 'unsigned long'), which requires 8 byte alignment
< ../Core/t_cholmod_dense.c:146:15: runtime error: member access within misaligned address 0x7fff9c66f83c for type 'cholmod_dense' (aka 'struct cholmod_dense_struct'), which requires 8 byte alignment
< ../Core/t_cholmod_dense.c:146:15: runtime error: load of misaligned address 0x7fff9c66f844 for type 'size_t' (aka 'unsigned long'), which requires 8 byte alignment
< 0x7fff9c66f844: note: pointer points here
< ../Core/t_cholmod_dense.c:147:12: runtime error: member access within misaligned address 0x7fff9c66f83c for type 'cholmod_dense' (aka 'struct cholmod_dense_struct'), which requires 8 byte alignment
< ../Core/t_cholmod_dense.c:147:12: runtime error: load of misaligned address 0x7fff9c66f854 for type 'size_t' (aka 'unsigned long'), which requires 8 byte alignment
< ../Core/t_cholmod_dense.c:148:13: runtime error: member access within misaligned address 0x7fff9c66f83c for type 'cholmod_dense' (aka 'struct cholmod_dense_struct'), which requires 8 byte alignment
< ../Core/t_cholmod_dense.c:148:13: runtime error: load of misaligned address 0x7fff9c66f85c for type 'void *', which requires 8 byte alignment
< ../Core/t_cholmod_dense.c:149:13: runtime error: member access within misaligned address 0x7fff9c66f83c for type 'cholmod_dense' (aka 'struct cholmod_dense_struct'), which requires 8 byte alignment
< ../Core/t_cholmod_dense.c:149:13: runtime error: load of misaligned address 0x7fff9c66f864 for type 'void *', which requires 8 byte alignment
< 0x7fff9c66f864: note: pointer points here
< ../Core/cholmod_copy.c:286:32: runtime error: member access within misaligned address 0x7fff9c69a26c for type 'cholmod_sparse' (aka 'struct cholmod_sparse_struct'), which requires 8 byte alignment
< 0x7fff9c69a26c: note: pointer points here
< ../Core/cholmod_copy.c:287:5: runtime error: member access within misaligned address 0x7fff9c69a26c for type 'cholmod_sparse' (aka 'struct cholmod_sparse_struct'), which requires 8 byte alignment
< ../Core/cholmod_copy.c:287:5: runtime error: load of misaligned address 0x7fff9c69a29c for type 'void *', which requires 8 byte alignment
< 0x7fff9c69a29c: note: pointer points here
< ../Core/cholmod_copy.c:289:15: runtime error: member access within misaligned address 0x7fff9c69a26c for type 'cholmod_sparse' (aka 'struct cholmod_sparse_struct'), which requires 8 byte alignment
< ../Core/cholmod_copy.c:289:15: runtime error: load of misaligned address 0x7fff9c69a26c for type 'size_t' (aka 'unsigned long'), which requires 8 byte alignment
< ../Core/cholmod_copy.c:290:15: runtime error: member access within misaligned address 0x7fff9c69a26c for type 'cholmod_sparse' (aka 'struct cholmod_sparse_struct'), which requires 8 byte alignment
< ../Core/cholmod_copy.c:290:15: runtime error: load of misaligned address 0x7fff9c69a274 for type 'size_t' (aka 'unsigned long'), which requires 8 byte alignment
< 0x7fff9c69a274: note: pointer points here
< ../Core/cholmod_copy.c:291:22: runtime error: member access within misaligned address 0x7fff9c69a26c for type 'cholmod_sparse' (aka 'struct cholmod_sparse_struct'), which requires 8 byte alignment
< ../Core/cholmod_copy.c:315:14: runtime error: member access within misaligned address 0x7fff9c69a26c for type 'cholmod_sparse' (aka 'struct cholmod_sparse_struct'), which requires 8 byte alignment
< ../Core/cholmod_band.c:74:32: runtime error: member access within misaligned address 0x7fff9c69a26c for type 'cholmod_sparse' (aka 'struct cholmod_sparse_struct'), which requires 8 byte alignment
< ../Core/cholmod_band.c:75:5: runtime error: member access within misaligned address 0x7fff9c69a26c for type 'cholmod_sparse' (aka 'struct cholmod_sparse_struct'), which requires 8 byte alignment
< ../Core/cholmod_band.c:75:5: runtime error: load of misaligned address 0x7fff9c69a29c for type 'void *', which requires 8 byte alignment
< ../Core/cholmod_band.c:77:17: runtime error: member access within misaligned address 0x7fff9c69a26c for type 'cholmod_sparse' (aka 'struct cholmod_sparse_struct'), which requires 8 byte alignment
< ../Core/cholmod_band.c:93:14: runtime error: member access within misaligned address 0x7fff9c69a26c for type 'cholmod_sparse' (aka 'struct cholmod_sparse_struct'), which requires 8 byte alignment
< ../Core/cholmod_band.c:93:14: runtime error: load of misaligned address 0x7fff9c69a284 for type 'void *', which requires 8 byte alignment
< 0x7fff9c69a284: note: pointer points here
< ../Core/cholmod_band.c:94:14: runtime error: member access within misaligned address 0x7fff9c69a26c for type 'cholmod_sparse' (aka 'struct cholmod_sparse_struct'), which requires 8 byte alignment
< ../Core/cholmod_band.c:94:14: runtime error: load of misaligned address 0x7fff9c69a294 for type 'void *', which requires 8 byte alignment
< 0x7fff9c69a294: note: pointer points here
< ../Core/cholmod_band.c:95:14: runtime error: member access within misaligned address 0x7fff9c69a26c for type 'cholmod_sparse' (aka 'struct cholmod_sparse_struct'), which requires 8 byte alignment
< ../Core/cholmod_band.c:95:14: runtime error: load of misaligned address 0x7fff9c69a28c for type 'void *', which requires 8 byte alignment
< 0x7fff9c69a28c: note: pointer points here
< ../Core/cholmod_band.c:96:14: runtime error: member access within misaligned address 0x7fff9c69a26c for type 'cholmod_sparse' (aka 'struct cholmod_sparse_struct'), which requires 8 byte alignment
< ../Core/cholmod_band.c:96:14: runtime error: load of misaligned address 0x7fff9c69a29c for type 'void *', which requires 8 byte alignment
< ../Core/cholmod_band.c:97:17: runtime error: member access within misaligned address 0x7fff9c69a26c for type 'cholmod_sparse' (aka 'struct cholmod_sparse_struct'), which requires 8 byte alignment
< ../Core/cholmod_band.c:100:12: runtime error: member access within misaligned address 0x7fff9c69a26c for type 'cholmod_sparse' (aka 'struct cholmod_sparse_struct'), which requires 8 byte alignment
< ../Core/cholmod_band.c:105:12: runtime error: member access within misaligned address 0x7fff9c69a26c for type 'cholmod_sparse' (aka 'struct cholmod_sparse_struct'), which requires 8 byte alignment
< ../Core/cholmod_band.c:110:15: runtime error: member access within misaligned address 0x7fff9c69a26c for type 'cholmod_sparse' (aka 'struct cholmod_sparse_struct'), which requires 8 byte alignment
< ../Core/cholmod_band.c:110:15: runtime error: load of misaligned address 0x7fff9c69a274 for type 'size_t' (aka 'unsigned long'), which requires 8 byte alignment
< ../Core/cholmod_band.c:111:15: runtime error: member access within misaligned address 0x7fff9c69a26c for type 'cholmod_sparse' (aka 'struct cholmod_sparse_struct'), which requires 8 byte alignment
< ../Core/cholmod_band.c:111:15: runtime error: load of misaligned address 0x7fff9c69a26c for type 'size_t' (aka 'unsigned long'), which requires 8 byte alignment
< ../Core/cholmod_band.c:185:35: runtime error: member access within misaligned address 0x7fff9c69a26c for type 'cholmod_sparse' (aka 'struct cholmod_sparse_struct'), which requires 8 byte alignment
< ../Core/cholmod_band.c:185:35: runtime error: load of misaligned address 0x7fff9c69a26c for type 'size_t' (aka 'unsigned long'), which requires 8 byte alignment
< ../Core/cholmod_band.c:186:6: runtime error: member access within misaligned address 0x7fff9c69a26c for type 'cholmod_sparse' (aka 'struct cholmod_sparse_struct'), which requires 8 byte alignment
< ../Core/cholmod_band.c:186:25: runtime error: member access within misaligned address 0x7fff9c69a26c for type 'cholmod_sparse' (aka 'struct cholmod_sparse_struct'), which requires 8 byte alignment