* using log directory ‘/home/bolker/lme4check2/check/languageR.Rcheck’
* using R Under development (unstable) (2015-06-08 r68489)
* using platform: x86_64-unknown-linux-gnu (64-bit)
* using session charset: UTF-8
* checking for file ‘languageR/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘languageR’ version ‘1.4.1’
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for executable files ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘languageR’ can be installed ... OK
* checking installed package size ... OK
* checking package directory ... OK
* checking DESCRIPTION meta-information ... NOTE
Malformed Title field: should not end in a period.
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking dependencies in R code ... NOTE
'library' or 'require' calls in package code:
‘MASS’ ‘lattice’ ‘lme4’ ‘rms’ ‘zipfR’
Please use :: or requireNamespace() instead.
See section 'Suggested packages' in the 'Writing R Extensions' manual.
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... NOTE
acf.fnc: no visible global function definition for ‘xyplot’
acf.fnc : <anonymous>: no visible global function definition for
‘panel.abline’
acf.fnc : <anonymous>: no visible global function definition for
‘panel.number’
acf.fnc : <anonymous>: no visible global function definition for
‘panel.xyplot’
acf.fnc: no visible global function definition for ‘strip.custom’
compare.richness.fnc: no visible global function definition for ‘N’
compare.richness.fnc: no visible global function definition for ‘lnre’
compare.richness.fnc: no visible global function definition for ‘VV’
compare.richness.fnc: no visible global function definition for ‘VVm’
compare.richness.fnc: no visible global function definition for ‘V’
compare.richness.fnc: no visible global function definition for ‘Vm’
growth.fnc: no visible binding for global variable ‘alice’
growth2vgc.fnc: no visible global function definition for ‘vgc’
lmerPlotInt.fnc: no visible global function definition for ‘isLMM’
lmerPlotInt.fnc: no visible global function definition for ‘isGLMM’
lmerPlotInt.fnc: no visible global function definition for ‘fixef’
makeDefaultMatrix.fnc: no visible global function definition for
‘fixef’
mvrnormplot.fnc: no visible global function definition for ‘mvrnorm’
plotLMER.fnc: no visible global function definition for ‘ranef’
plotlogistic.fit.fnc: no visible global function definition for ‘cut2’
plotlogistic.fit.fnc: no visible global function definition for
‘equal.count’
preparePredictor.fnc: no visible global function definition for ‘fixef’
preparePredictor.fnc: no visible global function definition for ‘ranef’
simulateLatinsquare.fnc: no visible global function definition for
‘lmer’
simulateLatinsquare.fnc: no visible global function definition for
‘ranef’
simulateLatinsquare.fnc: no visible global function definition for
‘fixef’
simulateQuasif.fnc: no visible global function definition for ‘lmer’
simulateQuasif.fnc: no visible global function definition for ‘mvrnorm’
simulateQuasif.fnc: no visible global function definition for ‘ranef’
simulateQuasif.fnc: no visible global function definition for ‘fixef’
simulateRegression.fnc: no visible global function definition for
‘lmer’
simulateRegression.fnc: no visible global function definition for
‘VarCorr’
simulateRegression.fnc: no visible global function definition for
‘lmList’
text2spc.fnc: no visible global function definition for ‘spc’
xylowess.fnc: no visible global function definition for ‘xyplot’
xylowess.fnc : <anonymous>: no visible global function definition for
‘panel.grid’
xylowess.fnc : <anonymous>: no visible global function definition for
‘panel.xyplot’
xylowess.fnc : <anonymous>: no visible global function definition for
‘panel.loess’
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of ‘data’ directory ... OK
* checking data for non-ASCII characters ... OK
* checking data for ASCII and uncompressed saves ... OK
* checking examples ... OK
* checking PDF version of manual ... OK
* DONE
Status: 3 NOTEs