Cmat
knit2pdf("singingmouse3.Rnw")
options("device")
knit2pdf("singingmouse3.Rnw")
knit2pdf("singingmouse3.Rnw")
?PBrefdist
library(parallel)
head(dat)
m9C2
names(fixef(m9C1))
ls()
ls(pattern="m9C*")
ls(pattern=c("m9C*","X*"))
ls(pattern=c("(m9C*|X*)")
)
ls(pattern="X*")
ls(pattern="X.*")
ls(pattern="(m9C.*|X.*)")
rm(form)
m9C_all
str(m9C_all)
slotNames(m9C_all)
m9C_all@call
debug(tmpf)
b1@call
?eval
b1@call
b1@call
eval(b1@call)
b1@call <- eval(b1@call)
b1@call
eval(b1@call)
b1@call
str(b1@call)
b1@call$formula
b1@call
Q
L
L
q()
n
debug(glmmadbm)
debug(glmmadmb)
eval(mf$formula)
debug(process_randformula)
Droplevels
lapply(LHS,cfun,mdata=data)
LHS
cfun
data
lapply(LHS,cfun)
lapply(LHS,cfun,mdata=NULL)
LHS
cfun
LHS
cfun(LHS[1])
cfun(LHS[1],mdata=NULL)
model.matrix(as.formula(paste("~",lbit)))
lbit <- "1 "
model.matrix(as.formula(paste("~",lbit)))
model.matrix(y~1,data=NULL)
Q
Q
apropos("formula")
?asOneSidedFormula
model.matrix(~1,data=data.frame(y=1:5))
detach("package:glmmadmb",unload=TRUE)
search()
detach(2,unload=TRUE)
library("glmmADMB")
options(error=recover)
2
groups
rfun
Droplevels
lapply(groups,rfun,rdata=data)
Droplevels
Q
q()
n
debug(rformula)
debug(glmmADMB:::rformula)
debug(glmmADMB:::process_randformula)
Droplevels
data
lapply(groups,rfun,rdata=data)
lapply(groups,rfun,rdata=NULL)
rfun(groups[[1]],rdata=NULL)
rfun(groups[[1]],data)
rfun(groups[[1]],data=data.frame(y=15))
rfun(groups[[1]],rdata=data.frame(y=15))
Droplevels
rfun
debug(rfun)
rfun(groups[[1]],rdata=data.frame(y=15))
Droplevels
data
Droplevels(eval(parse(text=lab)))
Droplevels(eval(parse(text=labs[1])))
labs
f
eval(pars(text=lab))
eval(parse(text=lab))
lab <- labs[[1]]
eval(parse(text=lab))
eval(parse(text=lab),parent.frame())
lab
eval(parse(text=lab),data)
)
lab
Droplevels
Q
search()
detach(2,unload=TRUE)
model.matrix(~1)
debug(glmmadmb:::process_randformula)
debug(glmmADMB:::process_randformula)
rchar
f[1]
f[2]
as.character(f[2])
cfun(LHS[[1]],mdata=data)
debug(cfun)
cfun(LHS[[1]],mdata=data)
mdata
is.data.frame(mdata)
f[3]
nrow(mdata)
m
Q
detach(2)
c
Q
q()
n
?rm
library(lme4Eigen)
?lmer
?getME
q()
n
library(glmmADMB)
?glmmadmb


bfit2
q()
n
q()
n
